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WormBase Tree Display for Gene: WBGene00033775

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Name Class

WBGene00033775SMapS_parentSequencecb25.fpc2888b2
IdentityVersion2
NameCGC_nameCbr-cdkr-3From_analysisInferred_from_orthology
Sequence_nameCBG12909
Molecular_nameCBG12909
CBG12909.1
CBP09196
Other_nameCBG_12909Accession_evidenceNDBHE600927
Public_nameCbr-cdkr-3
DB_infoDatabaseNDBlocus_tagCBG_12909
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
204 Jun 2013 14:58:47WBPerson2970Name_changeCGC_nameCbr-cdkr-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcdkr
RNASeq_FPKMWBls:000000227.0111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
28.8093From_analysisRNASeq.briggsae.WBls:0000002.control_mean
28.8731From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
30.5437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
23.6599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
27.5219From_analysisRNASeq.briggsae.WBls:0000002.control_mean
27.9421From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000339.8527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
41.1841From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
42.5155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
41.5675From_analysisRNASeq.briggsae.WBls:0000003.control_mean
42.3344From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000431.2287From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
34.3563From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
37.484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
29.3759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
34.1213From_analysisRNASeq.briggsae.WBls:0000004.control_mean
36.1397From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
36.3784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.723435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
10.2443From_analysisRNASeq.briggsae.WBls:0000027.control_mean
25.8088From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.20067From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
11.2213From_analysisRNASeq.briggsae.WBls:0000027.control_mean
14.1525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.17659From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003523.848From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.9745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
17.6746From_analysisRNASeq.briggsae.WBls:0000038.control_median
20.5346From_analysisRNASeq.briggsae.WBls:0000038.control_mean
21.3747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
41.0608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.72824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004141.7089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
57.2713From_analysisRNASeq.briggsae.WBls:0000041.control_mean
59.9415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
60.2489From_analysisRNASeq.briggsae.WBls:0000041.control_median
60.5562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
66.8785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
53.1679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
56.5798From_analysisRNASeq.briggsae.WBls:0000041.control_mean
57.2258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
58.5836From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006317.4113From_analysisRNASeq.briggsae.WBls:0000063.control_mean
17.9999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
19.5436From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
23.5555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
25.9574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
19.0844From_analysisRNASeq.briggsae.WBls:0000063.control_mean
21.5495From_analysisRNASeq.briggsae.WBls:0000063.control_median
27.4498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010125.8088From_analysisRNASeq.briggsae.total_over_all_stages.control_median
26.9562From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
27.2304From_analysisRNASeq.briggsae.total_over_all_stages.control_median
28.9899From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (29)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: CDK5 regulatory subunit-associated protein 3. Is an ortholog of C. elegans cdkr-3. In C. elegans, cdkr-3 is involved in IRE1-mediated unfolded protein response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12909
Corresponding_CDS_historyCBG12909:bp194
Corresponding_transcriptCBG12909.1
Other_sequence (19)
Experimental_infoExpr_patternExpr1065220
Microarray_resultsGPL8303_CB6_WBGene00033775_A
GPL8303_CB6_WBGene00033775_B
GPL14143_CBG12909_697-756_0.871_37_C
GPL14143_CBG12909_911-970_0.916_14_B
GPL14143_CBG12909_1141-1200_0.934_6_A
MethodGene