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WormBase Tree Display for Gene: WBGene00035121

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Name Class

WBGene00035121SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-unc-97From_analysisInferred_from_orthology
Sequence_nameCBG14705
Molecular_nameCBG14705a
CBG14705a.1
CBP03443
CBG14705b
CBP39886
CBG14705b.1
Other_nameCBG_14705Accession_evidenceNDBHE600983
Public_nameCbr-unc-97
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-97
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000230.3314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
35.2329From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
36.0354From_analysisRNASeq.briggsae.WBls:0000002.control_mean
42.5418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
22.643From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
32.6873From_analysisRNASeq.briggsae.WBls:0000002.control_mean
32.7822From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000322.7291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
26.3409From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
29.9527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
27.1376From_analysisRNASeq.briggsae.WBls:0000003.control_mean
28.7309From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000486.4496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
89.5109From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
92.5722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
85.1664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
85.797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
88.5603From_analysisRNASeq.briggsae.WBls:0000004.control_mean
92.8163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002724.85From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
36.7634From_analysisRNASeq.briggsae.WBls:0000027.control_mean
76.4032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.03713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
32.7063From_analysisRNASeq.briggsae.WBls:0000027.control_median
37.7132From_analysisRNASeq.briggsae.WBls:0000027.control_mean
40.5626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003532.6159From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.4901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
23.2526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
23.6972From_analysisRNASeq.briggsae.WBls:0000038.control_median
24.1418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
31.3986From_analysisRNASeq.briggsae.WBls:0000038.control_mean
67.7099From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004110.2492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
10.753From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.2569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.1546From_analysisRNASeq.briggsae.WBls:0000041.control_mean
19.7443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.36816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
10.6213From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
10.9391From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.6827From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.8561From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006313.7001From_analysisRNASeq.briggsae.WBls:0000063.control_mean
15.9226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.2433From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
17.7662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
18.5685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
14.8317From_analysisRNASeq.briggsae.WBls:0000063.control_mean
17.0047From_analysisRNASeq.briggsae.WBls:0000063.control_median
20.4895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010124.1418From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.2542From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
24.4959From_analysisRNASeq.briggsae.total_over_all_stages.control_median
35.2383From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00006826Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00051653Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00147590Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00114092Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00126453Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g3265Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10020Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g746Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10565Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2535Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9089Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g150Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20190Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g13808Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17641Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00195.g6739Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-97Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6604Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00309.g9167Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00487Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024445Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12283Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5931Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0237200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00223627Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g19093Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240293Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257408Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00292255Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00040908Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, LIM-type; LIM domain; and LIM and senescent cell antigen-like-containing domain protein 1-like. Is an ortholog of C. elegans unc-97. In C. elegans, unc-97 is involved in several processes, including muscle cell cellular homeostasis; positive regulation of sarcomere organization; and sensory perception of mechanical stimulus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14705a
CBG14705b
Corresponding_CDS_historyCBG14705:bp194
CBG14705:bp255
Corresponding_transcriptCBG14705a.1
CBG14705b.1
Other_sequence (52)
Experimental_infoExpr_patternExpr1069941
Microarray_resultsGPL8303_CB6_WBGene00035121_A
GPL8303_CB6_WBGene00035121_B
GPL14143_CBG14705_415-474_0.790_24_B
GPL14143_CBG14705_492-551_0.794_21_C
GPL14143_CBG14705_833-892_0.840_8_A
MethodGene