WormBase Tree Display for Gene: WBGene00035201

WBGene00035201 SMap: S_parent: Sequence: cb25.fpc3857a
  Identity: Version: 6
    Name: CGC_name: Cbr-mec-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG14809
      Molecular_name (18)
      Other_name: CBG_14809 Accession_evidence: NDB HE600983
        CBG_14805
        CBG_14808
        CBG_14807
        CBG_14806
      Public_name: Cbr-mec-2
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:04 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-mec-2
        3 31 Aug 2016 10:29:44 WBPerson4025 Event: Acquires_merge: WBGene00035197
        4 31 Aug 2016 10:29:44 WBPerson4025 Event: Acquires_merge: WBGene00035200
        5 31 Aug 2016 10:29:44 WBPerson4025 Event: Acquires_merge: WBGene00035199
        6 31 Aug 2016 10:29:44 WBPerson4025 Event: Acquires_merge: WBGene00035198
      Acquires_merge: WBGene00035197
        WBGene00035198
        WBGene00035199
        WBGene00035200
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mec
    Allele (14)
    RNASeq_FPKM: WBls:0000002 10.98 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        11.4502 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        14.2103 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        9.16028 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        10.0701 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        10.6217 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        8.13622 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.54501 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        1.09002 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        1.03462 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        2.01385 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 11.4876 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        12.1096 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        12.7316 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        12.5673 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        13.049 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        13.7015 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        14.757 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 1.16498 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        12.1288 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        29.9683 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        5.25323 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        13.1943 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        14.3805 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        21.1353 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 15.2016 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 10.4532 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        12.8223 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        14.2819 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        2.49473 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        8.08409 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        9.42076 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 1.40123 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1.96039 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        2.19034 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.42028 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        3.31294 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        7.46987 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        3.98297 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        4.22751 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.54566 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        6.56762 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.677879 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.09944 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        2.72794 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        2.77991 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        4.31146 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        2.51106 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        2.75393 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        4.56916 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 10.1354 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        7.46987 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        10.0768 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        7.77698 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00138678
      00138679
    Ortholog (39)
    Paralog: WBGene00029931 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035084 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036256 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036594 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036958 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036959 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036961 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037283 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042595 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in plasma membrane. Is an ortholog of C. elegans mec-2. In C. elegans, mec-2 is involved in positive regulation of multicellular organismal process and response to mechanical stimulus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG14809a
      CBG14809b
      CBG14809c
      CBG14809d
      CBG14809e
      CBG14809f
    Corresponding_CDS_history: CBG14809:bp194
      CBG14809:bp255
    Corresponding_transcript: CBG14809a.1
      CBG14809b.1
      CBG14809c.1
      CBG14809d.1
      CBG14809e.1
      CBG14809f.1
    Other_sequence (82)
  Experimental_info: Expr_pattern: Expr1053267
      Expr1055265
      Expr1057558
      Expr1058073
      Expr1069598
    Microarray_results (14)
  Method: Gene