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WormBase Tree Display for Gene: WBGene00042595

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Name Class

WBGene00042595SMapS_parentSequencecb25.NA_171
IdentityVersion2
NameCGC_nameCbr-stl-1From_analysisInferred_from_orthology
Sequence_nameCBG24499
Molecular_nameCBG24499
CBG24499.1
CBP30854
Other_nameCBG_24499Accession_evidenceNDBHE601095
Public_nameCbr-stl-1
DB_infoDatabaseNDBlocus_tagCBG_24499
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-stl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classstl
RNASeq_FPKMWBls:000000243.272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
48.6032From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
49.1497From_analysisRNASeq.briggsae.WBls:0000002.control_mean
55.5739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
41.6794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
45.9376From_analysisRNASeq.briggsae.WBls:0000002.control_median
47.2821From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000337.8648From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
40.8297From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
43.7946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
31.4974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
37.7189From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000430.5212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
32.3022From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
34.0832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
28.2229From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
32.5333From_analysisRNASeq.briggsae.WBls:0000004.control_mean
32.6239From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
37.2151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002712.2088From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
27.6109From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.14637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
65.4774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
23.2691From_analysisRNASeq.briggsae.WBls:0000027.control_median
29.2905From_analysisRNASeq.briggsae.WBls:0000027.control_mean
34.3295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003556.0254From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038101.4From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
17.2626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
49.6589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
61.8547From_analysisRNASeq.briggsae.WBls:0000038.control_mean
64.3781From_analysisRNASeq.briggsae.WBls:0000038.control_median
79.0972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004156.088From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
63.5604From_analysisRNASeq.briggsae.WBls:0000041.control_mean
64.1833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
64.6219From_analysisRNASeq.briggsae.WBls:0000041.control_median
65.0606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
68.9097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
61.4375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
65.7415From_analysisRNASeq.briggsae.WBls:0000041.control_mean
78.7702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006342.2223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
44.3402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
49.0431From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
52.9019From_analysisRNASeq.briggsae.WBls:0000063.control_mean
58.3044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
70.5994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
44.3861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
46.7146From_analysisRNASeq.briggsae.WBls:0000063.control_median
51.4826From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010146.6645From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
48.6032From_analysisRNASeq.briggsae.total_over_all_stages.control_median
44.0674From_analysisRNASeq.briggsae.total_over_all_stages.control_median
45.8798From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145620
Ortholog (33)
ParalogWBGene00029931Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035084Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035201Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036256Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036594Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036958Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036959Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036961Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037283Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans stl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24499
Corresponding_CDS_historyCBG24499:bp194
Corresponding_transcriptCBG24499.1
Other_sequence (73)
Experimental_infoExpr_patternExpr1056302
Microarray_resultsGPL8303_CB6_WBGene00042595_A
GPL8303_CB6_WBGene00042595_B
GPL8303_CB6_WBGene00042595_C
GPL14143_CBG24499_366-425_0.889_43_C
GPL14143_CBG24499_664-723_0.949_7_B
GPL14143_CBG24499_865-924_0.968_2_A
MethodGene