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WormBase Tree Display for Gene: WBGene00036400

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Name Class

WBGene00036400SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-inf-1From_analysisInferred_from_orthology
Sequence_nameCBG16478
Molecular_nameCBG16478
CBG16478.1
CBP03954
Other_nameCBG_16478Accession_evidenceNDBHE600949
Public_nameCbr-inf-1
DB_infoDatabaseNDBlocus_tagCBG_16478
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
219 Sep 2007 11:13:51WBPerson2970Name_changeCGC_nameCbr-inf-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classinf
RNASeq_FPKMWBls:0000002405.818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
463.325From_analysisRNASeq.briggsae.WBls:0000002.control_mean
468.241From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
515.917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
480.033From_analysisRNASeq.briggsae.WBls:0000002.control_mean
492.079From_analysisRNASeq.briggsae.WBls:0000002.control_median
530.157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003484.825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
532.535From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
580.245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
528.518From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
531.196From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004537.45From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
553.554From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
569.657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
542.014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
583.152From_analysisRNASeq.briggsae.WBls:0000004.control_mean
623.038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
643.6From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027166.944From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
257.78From_analysisRNASeq.briggsae.WBls:0000027.control_mean
536.526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
69.8698From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
220.579From_analysisRNASeq.briggsae.WBls:0000027.control_median
261.888From_analysisRNASeq.briggsae.WBls:0000027.control_mean
274.214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035416.188From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038278.816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
382.511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
393.663From_analysisRNASeq.briggsae.WBls:0000038.control_median
404.814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
460.815From_analysisRNASeq.briggsae.WBls:0000038.control_mean
777.12From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041417.186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
578.219From_analysisRNASeq.briggsae.WBls:0000041.control_mean
604.853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
621.887From_analysisRNASeq.briggsae.WBls:0000041.control_median
638.921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
651.915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
320.033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
405.229From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
506.356From_analysisRNASeq.briggsae.WBls:0000041.control_mean
511.02From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000631087.74From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
611.845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
629.408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
640.7From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
694.596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
732.858From_analysisRNASeq.briggsae.WBls:0000063.control_mean
429.377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
635.054From_analysisRNASeq.briggsae.WBls:0000063.control_median
682.278From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101490.168From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
536.526From_analysisRNASeq.briggsae.total_over_all_stages.control_median
487.133From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
529.338From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00139789
00139790
Contained_in_operonCBOPA0461
Ortholog (29)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and nucleic acid binding activity. Is an ortholog of C. elegans inf-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16478
Corresponding_CDS_historyCBG16478:bp194
Corresponding_transcriptCBG16478.1
Other_sequence (305)
Experimental_infoExpr_patternExpr1056517
Microarray_resultsGPL8303_CB6_WBGene00036400_A
GPL8303_CB6_WBGene00036400_B
GPL14143_CBG16478_674-733_0.919_11_C
GPL14143_CBG16478_825-884_0.926_6_B
GPL14143_CBG16478_1131-1190_0.949_1_A
Expression_clusterWBPaper00051425:CB_L4_vs_embryo_upregulated
MethodGene