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WormBase Tree Display for Gene: WBGene00040395

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Name Class

WBGene00040395SMapS_parentSequencecb25.fpc4260b
IdentityVersion2
NameCGC_nameCbr-pigc-1From_analysisInferred_from_orthology
Sequence_nameCBG21692
Molecular_nameCBG21692
CBG21692.1
CBP44269
Other_nameCBG_21692Accession_evidenceNDBHE600966
Public_nameCbr-pigc-1
DB_infoDatabaseNDBlocus_tagCBG_21692
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
208 Feb 2019 15:42:26WBPerson1983Name_changeCGC_nameCbr-pigc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpigc
RNASeq_FPKMWBls:000000227.0313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
29.1966From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
30.7797From_analysisRNASeq.briggsae.WBls:0000002.control_mean
36.1111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
32.6539From_analysisRNASeq.briggsae.WBls:0000002.control_median
32.6976From_analysisRNASeq.briggsae.WBls:0000002.control_mean
38.4513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000343.7173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
51.9736From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
60.2299From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
46.9267From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
50.2913From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000439.3641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
39.4333From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
39.5024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
30.71From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
35.3539From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
38.0565From_analysisRNASeq.briggsae.WBls:0000004.control_mean
45.3521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.158From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.55483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
25.4455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.47379From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
11.5602From_analysisRNASeq.briggsae.WBls:0000027.control_median
12.5302From_analysisRNASeq.briggsae.WBls:0000027.control_mean
19.6466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003527.1075From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.5484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
29.0651From_analysisRNASeq.briggsae.WBls:0000038.control_mean
33.0649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
33.3963From_analysisRNASeq.briggsae.WBls:0000038.control_median
33.7276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
38.9197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004137.454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
39.1945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
39.3536From_analysisRNASeq.briggsae.WBls:0000041.control_mean
39.4224From_analysisRNASeq.briggsae.WBls:0000041.control_median
39.6503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
41.1157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
40.383From_analysisRNASeq.briggsae.WBls:0000041.control_median
41.2267From_analysisRNASeq.briggsae.WBls:0000041.control_mean
43.6929From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
46.2528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006320.9807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.9181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
27.8891From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
28.4595From_analysisRNASeq.briggsae.WBls:0000063.control_mean
32.6194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
33.8902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
21.5523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
27.3083From_analysisRNASeq.briggsae.WBls:0000063.control_mean
27.4036From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010129.7897From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
32.6194From_analysisRNASeq.briggsae.total_over_all_stages.control_median
31.3642From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
33.3963From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00143813
00143814
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to be involved in GPI anchor biosynthetic process. Predicted to be located in membrane. Is an ortholog of C. elegans pigc-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21692
Corresponding_CDS_historyCBG21692:bp194
CBG21692:bp255
Corresponding_transcriptCBG21692.1
Other_sequence (11)
Experimental_infoExpr_patternExpr1052161
Microarray_resultsGPL8303_CB6_WBGene00040395_A
GPL8303_CB6_WBGene00040395_C
GPL14143_CBG21692_90-149_0.868_12_C
GPL14143_CBG21692_336-395_0.466_84_B
GPL14143_CBG21692_452-511_0.949_1_A
MethodGene