WormBase Tree Display for Gene: WBGene00044618
expand all nodes | collapse all nodes | view schema
| WBGene00044618 | SMap | S_parent | Sequence | K08D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bus-2 | Paper_evidence | WBPaper00036131 | |||||
| Person_evidence | WBPerson261 | ||||||||
| WBPerson5119 | |||||||||
| Sequence_name | K08D12.5 | ||||||||
| Molecular_name | K08D12.5a | ||||||||
| K08D12.5a.1 | |||||||||
| CE44703 | |||||||||
| K08D12.5b | |||||||||
| CE44697 | |||||||||
| K08D12.5b.1 | |||||||||
| Other_name | CELE_K08D12.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | bus-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 01 Sep 2005 10:24:02 | WBPerson2970 | Event | Created | |||
| 2 | 23 Apr 2010 13:30:44 | WBPerson2970 | Event | Acquires_merge | WBGene00019539 | ||||
| Name_change | Sequence_name | K08D12.5 | |||||||
| Acquires_merge | WBGene00019539 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bus | ||||||||
| Reference_allele | WBVar00144918 | ||||||||
| Allele (67) | |||||||||
| Strain | WBStrain00004657 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (25) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Concise_description | bus-2 encodes a predicted glycosyltransferase that contains conserved domains of core-1 beta1,3 galactosyltransferases; bus-2 is required for bacterial infection, and for fully normal cuticle integrity; specifically, bus-2 is needed both for colonization by Microbacterium nematophilum (and the tail-swelling response to M. nematophilum infection), and for attachment of Yersinia pseudotuberculosis biofilms; bus-2 mutant animals exhibit defects in core-1 O-glycan synthesis, while also showing a concomitant increase in novel fucosyl O-glycans; a bus-2::RFP reporter is expressed in the posterior intestine as well as the hypodermal seam cells and spermatheca. | Paper_evidence | WBPaper00026735 | |||||
| WBPaper00029153 | |||||||||
| WBPaper00036131 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 14 Apr 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable hexosyltransferase activity. Predicted to be involved in protein O-linked glycosylation. Predicted to be located in membrane. Expressed in head muscle; intestine; seam cell; and spermatheca. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K08D12.5a | |||||||
| K08D12.5b | |||||||||
| Corresponding_transcript | K08D12.5a.1 | ||||||||
| K08D12.5b.1 | |||||||||
| Other_sequence | EY469264.1 | ||||||||
| ACC22680_1 | |||||||||
| GP00698 | |||||||||
| Associated_feature | WBsf718046 | ||||||||
| WBsf995507 | |||||||||
| WBsf995508 | |||||||||
| WBsf1016773 | |||||||||
| WBsf1016774 | |||||||||
| WBsf1016775 | |||||||||
| WBsf227969 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016790 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034127 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111025 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050266 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110997 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9274 | ||||||||
| Expr12846 | |||||||||
| Expr1153961 | |||||||||
| Expr2009688 | |||||||||
| Expr2027927 | |||||||||
| Drives_construct | WBCnstr00007656 | ||||||||
| WBCnstr00007657 | |||||||||
| Construct_product | WBCnstr00007656 | ||||||||
| WBCnstr00007657 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (89) | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| Map_info | Map | IV | Position | -16.2479 | Error | 0.013651 | |||
| Positive | Positive_clone | K08D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5457 | |||||||
| Reference (17) | |||||||||
| Method | Gene |
