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WormBase Tree Display for Gene: WBGene00045384

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Name Class

WBGene00045384SMapS_parentSequencecb25.fpc2976
IdentityVersion2
NameCGC_nameCbr-dpy-18
Sequence_nameCBG13195
Molecular_nameCBG13195
CBG13195.1
CBP03234
Other_nameCb-dpy-18
CBG_13195Accession_evidenceNDBHE601226
Public_nameCbr-dpy-18
DB_infoDatabaseNDBlocus_tagCBG_13195
SpeciesCaenorhabditis briggsae
HistoryVersion_change116 Apr 2007 12:02:13WBPerson2970EventCreated
223 Aug 2007 14:29:16WBPerson2970EventAcquires_mergeWBGene00033991
Acquires_mergeWBGene00033991
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
StrainWBStrain00041146
RNASeq_FPKMWBls:000000216.7074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
24.3472From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
30.2524From_analysisRNASeq.briggsae.WBls:0000002.control_mean
49.7025From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.7681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
20.5273From_analysisRNASeq.briggsae.WBls:0000002.control_median
25.6313From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000323.4854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
23.9272From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
24.3689From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
15.7017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
21.1853From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000435.6007From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
37.0321From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
38.4634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
32.9565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
35.5364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
42.2657From_analysisRNASeq.briggsae.WBls:0000004.control_mean
68.7716From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002715.7762From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.23154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
36.6592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
8.43798From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.5233From_analysisRNASeq.briggsae.WBls:0000027.control_median
16.9843From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.6086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003549.1496From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003817.4979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
21.9403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
28.0498From_analysisRNASeq.briggsae.WBls:0000038.control_median
32.0602From_analysisRNASeq.briggsae.WBls:0000038.control_mean
34.1593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
54.6435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004111.002From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.1688From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.6703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
13.5041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
9.1673From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
9.33368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
13.0872From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.9895From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.7206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
29.5409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000632.85187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.57785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.83537From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.85203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.18404From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.80307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.8437From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.36961From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.29745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010116.7074From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.1363From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
17.1026From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.3383From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00146177
00146178
00146179
00146180
00146181
Ortholog (49)
ParalogWBGene00028075Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028556Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042488Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271405Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271441Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable L-ascorbic acid binding activity; iron ion binding activity; and procollagen-proline 4-dioxygenase activity. Predicted to be located in endoplasmic reticulum. Is an ortholog of C. elegans dpy-18. In C. elegans, dpy-18 is involved in several processes, including cuticle development involved in collagen and cuticulin-based cuticle molting cycle; embryo development; and embryonic body morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13195
Corresponding_CDS_historyCBG13195:bp212
CBG13195:bp255
Corresponding_transcriptCBG13195.1
Other_sequence (89)
Experimental_infoExpr_patternExpr1069292
Microarray_resultsGPL8303_CB6_WBGene00033991_A
GPL8303_CB6_WBGene00033991_B
GPL14143_CBG13195_1429-1488_0.942_2_A
MethodGene