WormBase Tree Display for Gene: WBGene00052972

WBGene00052972 SMap: S_parent: Sequence: Crem_Contig13
  Identity: Version: 4
    Name: CGC_name: Cre-vars-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE05468
      Molecular_name: CRE05468
        CRE05468.1
        RP40963
      Other_name: cr01.sctg1.wum.834
        Cre-vrs-1 From_analysis: Inferred_from_orthology
      Public_name: Cre-vars-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-vrs-1
        3 03 Jul 2008 11:44:39 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE05468
                Other_name: cr01.sctg1.wum.834
        4 29 Jan 2010 10:38:19 WBPerson2970 Name_change: CGC_name: Cre-vars-1
                Other_name: Cre-vrs-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vars
    RNASeq_FPKM: WBls:0000004 11.7505 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        12.8085 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        13.8665 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.872092 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        11.0501 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        11.2183 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        11.3864 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        11.7455 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        8.76352 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 0.824191 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        10.0938 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        6.40311 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        8.29135 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 10.0199 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        10.1611 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        10.4211 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        13.3408 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        13.5847 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        16.2606 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        16.6776 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        17.9678 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 8.26208 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        8.32364 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00148175
      00148176
      00148177
      00148178
      00148179
      00148180
      00148181
    Ortholog (32)
    Paralog (15)
    Structured_description: Automated_description: Predicted to enable ATP binding activity; aminoacyl-tRNA editing activity; and valine-tRNA ligase activity. Predicted to be involved in valyl-tRNA aminoacylation. Is an ortholog of C. elegans vars-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE05468
    Corresponding_transcript: CRE05468.1
    Other_sequence (15)
  Experimental_info: Expr_pattern: Expr1104715
    Microarray_results: GPL14146_CRE05468_1967-2026_0.881_40_C
      GPL14146_CRE05468_2281-2340_0.917_13_B
      GPL14146_CRE05468_2492-2551_0.946_1_A
  Method: Gene