WormBase Tree Display for Gene: WBGene00053536

WBGene00053536 SMap: S_parent: Sequence: Crem_Contig1
  Identity: Version: 3
    Name: CGC_name: Cre-unc-130 From_analysis: Inferred_from_orthology
      Sequence_name: CRE02153
      Molecular_name: CRE02153
        CRE02153.1
        RP35743
      Other_name: cr01.sctg2.wum.320
      Public_name: Cre-unc-130
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-unc-130
        3 03 Jul 2008 11:44:43 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE02153
                Other_name: cr01.sctg2.wum.320
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 4.6511 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        5.31406 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        5.97703 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 10.0529 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        11.3564 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        11.8115 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        12.2665 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        1.30515 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        15.2837 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 1.7619 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        1.94964 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        3.33606 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 0.598517 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.762443 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.857828 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.34286 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        1.55876 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1.8279 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.35684 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        2.94903 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (11)
      WBls:0000101 1.94704 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        3.48607 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00148751
      00148752
      00148753
    Ortholog: WBGene00006853 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00025895 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00162107 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135423 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00223083 Brugia malayi From_analysis: WormBase-Compara
      WBGene00247633 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00247740 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00273977 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277241 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g6562 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9757 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17801 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17517 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22012 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16642 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4143 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9997 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12307 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g6217 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17758 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00163.g6013 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-130 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00116.g4749 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_23952 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005379 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10211 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g8241 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20332900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5909 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00266839 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00267178 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294027 Trichuris muris From_analysis: WormBase-Compara
    Paralog (22)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-130. In C. elegans, unc-130 is involved in several processes, including axon extension involved in axon guidance; negative regulation of transcription by RNA polymerase II; and nematode male tail tip morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE02153
    Corresponding_transcript: CRE02153.1
    Other_sequence: Dviv_isotig17565
      CR11553
      Dviv_isotig17564
      CBC08749_1
      CRC07576_1
      CR11552
      JI182349.1
  Experimental_info: Expr_pattern: Expr1097636
    Microarray_results: GPL14146_CRE02153_370-429_0.932_7_C
      GPL14146_CRE02153_445-504_0.914_20_B
      GPL14146_CRE02153_878-937_0.958_1_A
  Method: Gene