WormBase Tree Display for Gene: WBGene00054122

WBGene00054122 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 3
    Name: CGC_name: Cre-vps-33.2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26518
      Molecular_name: CRE26518
        CRE26518.1
        RP32785
      Other_name: cr01.sctg3.wum.142
      Public_name: Cre-vps-33.2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:47 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26518
                Other_name: cr01.sctg3.wum.142
        3 04 Jul 2008 11:06:35 WBPerson4055 Name_change: CGC_name: Cre-vps-33.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vps
    RNASeq_FPKM: WBls:0000004 15.8962 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        16.8237 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        17.7511 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.472216 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        4.43087 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        4.66754 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        5.42043 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        6.17332 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        6.41039 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 10.2047 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        12.3108 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        1.91262 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        8.14271 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
      WBls:0000041 21.2954 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        21.6173 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        22.8212 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        22.888 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        23.2331 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        23.645 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        23.7477 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        24.2011 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 12.3813 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        12.6809 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00149433
    Ortholog (35)
    Paralog: WBGene00069639 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00051283 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00055773 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00060193 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00064553 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00069637 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans vps-33.2. In C. elegans, vps-33.2 is involved in spermatocyte division. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26518
    Corresponding_transcript: CRE26518.1
    Other_sequence: Tcol_isotig02052
      CR04921
      Dviv_isotig29676
      JI169453.1
      Oden_isotig27960
      CRC09241_1
      Acan_isotig14752
  Experimental_info: Expr_pattern: Expr1096970
    Microarray_results: GPL14146_CRE26518_1698-1757_0.848_74_B
      GPL14146_CRE26518_522-581_0.857_54_C
      GPL14146_CRE26518_598-657_0.871_44_A
  Method: Gene