WormBase Tree Display for Gene: WBGene00069639

WBGene00069639 SMap: S_parent: Sequence: Crem_Contig158
  Identity: Version: 3
    Name: CGC_name: Cre-vps-33.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE23103
      Molecular_name: CRE23103
        CRE23103.1
        RP31145
      Other_name: cr01.sctg154.wum.34
      Public_name: Cre-vps-33.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-vps-33.1
        3 03 Jul 2008 11:46:26 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE23103
                Other_name: cr01.sctg154.wum.34
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vps
    RNASeq_FPKM: WBls:0000004 4.81444 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        6.21754 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        7.62063 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 1.11327 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        2.9903 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        3.22082 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        3.45134 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        3.84234 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        7.81446 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 1.44935 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        1.76405 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        1.99427 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        2.76942 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 13.9851 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        15.5002 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        16.4085 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        4.0244 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        4.12445 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        4.18049 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        9.0828 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        9.70386 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
      WBls:0000063 (12)
      WBls:0000101 4.07443 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        5.26571 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00163969
    Ortholog (37)
    Paralog: WBGene00054122 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00051283 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00055773 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00060193 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00064553 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00069637 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans vps-33.1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE23103
    Corresponding_transcript: CRE23103.1
    Other_sequence: FK803836.1
      AYC03903_1
      Dviv_isotig18332
      Dviv_isotig18331
      Acan_isotig08253
      Oden_isotig23037
      Dviv_isotig32629
      AE00233
  Experimental_info: Expr_pattern: Expr1100223
    Microarray_results: GPL14146_CRE23103_733-792_0.874_48_C
      GPL14146_CRE23103_833-892_0.926_8_B
      GPL14146_CRE23103_987-1046_0.807_81_A
  Method: Gene