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WormBase Tree Display for Gene: WBGene00054782

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Name Class

WBGene00054782SMapS_parentSequenceCrem_Contig7
IdentityVersion3
NameCGC_nameCre-cil-1From_analysisInferred_from_orthology
Sequence_nameCRE25131
Molecular_nameCRE25131
CRE25131.1
RP35826
Other_namecr01.sctg4.wum.138
Public_nameCre-cil-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:51WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE25131
Other_namecr01.sctg4.wum.138
315 Dec 2010 16:19:53WBPerson2970Name_changeCGC_nameCre-cil-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcil
RNASeq_FPKMWBls:000000421.3275From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
22.7041From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
24.0807From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000271.00706From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
11.3818From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
7.06513From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.17868From_analysisRNASeq.remanei.WBls:0000027.control_mean
8.16293From_analysisRNASeq.remanei.WBls:0000027.control_median
9.26073From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:000003810.5484From_analysisRNASeq.remanei.WBls:0000038.control_mean
14.0396From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
15.2748From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
2.3308From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004119.6918From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
21.6909From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
22.8416From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
32.1939From_analysisRNASeq.remanei.WBls:0000041.control_median
32.5241From_analysisRNASeq.remanei.WBls:0000041.control_mean
41.5461From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
43.6375From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
45.7368From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:000010113.0535From_analysisRNASeq.remanei.total_over_all_stages.control_median
16.1888From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00150106
00150107
00150108
OrthologWBGene00036552Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00086546Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00158191Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00211286Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00208053Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00223120Brugia malayiFrom_analysisWormBase-Compara
WBGene00212894Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00305197Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g6103Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5100Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11510Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16532Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g14565Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g567Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18920Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1782Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20856Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19007Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25910Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8207Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00017.g1130Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_III.g10425Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_III.g10427Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold552.g3634Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00014.g930Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00014.g932Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19664Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009754Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_009764Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11674Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_30229700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8318Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00286780Trichuris murisFrom_analysisWormBase-Compara
WBGene00302592Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00079802Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00059293Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00061174Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066603Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072763Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073117Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00085850Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation. Is an ortholog of C. elegans cil-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE25131
Corresponding_transcriptCRE25131.1
Other_sequenceCR00431
CR08684
CR08685
CBC10379_1
CRC08417_1
CRC05224_1
Experimental_infoExpr_patternExpr1098723
Microarray_resultsGPL14146_CRE25131_1100-1159_0.951_1_A
MethodGene