WormBase Tree Display for Gene: WBGene00068888

WBGene00068888 SMap: S_parent: Sequence: Crem_Contig201
  Identity: Version: 4
    Name: CGC_name: Cre-che-6 From_analysis: Inferred_from_orthology
      Sequence_name: CRE02614
      Molecular_name: CRE02614
        CRE02614.1
        RP45523
      Other_name: Cre-cng-4 From_analysis: Inferred_from_orthology
        cr01.sctg129.wum.14
      Public_name: Cre-che-6
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE02614
                Other_name: cr01.sctg129.wum.14
        3 12 Jul 2011 12:19:59 WBPerson2970 Name_change: CGC_name: Cre-cng-4
        4 15 Aug 2012 10:38:31 WBPerson2970 Name_change: CGC_name: Cre-che-6
                Other_name: Cre-cng-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: che
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
            RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
            RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
      WBls:0000024 (44)
      WBls:0000027 0.087228 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        0.174457 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0.394684 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        1.40428 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
            RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_mean
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 0.012162 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.018897 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.046146 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.050077 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.050792 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.055438 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.07722 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.090598 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 0.025427 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.254268 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
            RNASeq.remanei.WBls:0000063.control_median
      WBls:0000101 0.082056 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00163350
      00163351
      00163352
      00163353
    Ortholog: WBGene00000487 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00041056 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00156108 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g8797 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g16122 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g6191 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21363 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP31.g4705 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g4707 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12975 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6156 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g16017 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00092.g4117 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold570.g4225 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10738 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01061.g18056 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_15565 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016060 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10794 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40038300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g9766 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00055150 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00068887 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00070409 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00070259 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00073350 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00059947 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00061624 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00062089 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00086104 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans che-6. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE02614
    Corresponding_transcript: CRE02614.1
    Other_sequence: Oden_isotig20243
      Acan_isotig16606
  Experimental_info: Expr_pattern: Expr1105999
    Microarray_results: GPL14146_CRE02614_1161-1220_0.908_15_A
  Method: Gene