WormBase Tree Display for Gene: WBGene00072191

WBGene00072191 SMap: S_parent: Sequence: Crem_Contig300
  Identity: Version: 3
    Name (5)
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:29 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:41 WBPerson2970 Name_change: CGC_name: Cre-unc-38
        3 03 Jul 2008 11:46:35 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE13116
                Other_name: cr01.sctg321.wum.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 0.874925 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.904854 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.934782 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 11.5467 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        2.11805 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        4.19002 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        5.037 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        5.88399 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        5.93469 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 3.81279 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        4.81157 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        4.89167 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        5.73026 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.883412 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        1.13696 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.24733 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        2.38173 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2.40513 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        3.56293 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        3.66056 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        3.79919 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 0.772062 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        1.03649 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        1.10938 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        1.18226 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        1.52234 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        1.57275 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        2.38074 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        3.33233 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        4.94676 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
      WBls:0000101 1.8454 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        2.67296 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00166029
      00166030
      00166031
      00166032
      00166033
      00166034
      00166035
      00166036
    Ortholog: WBGene00006774 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039464 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00152462 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00162467 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00176985 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00223751 Brugia malayi From_analysis: WormBase-Compara
      WBGene00228955 Brugia malayi From_analysis: WormBase-Compara
      WBGene00237784 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238596 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00274031 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g10464 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g10467 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12243 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g12244 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9547 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13080 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10706 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g143 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15409 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4843 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g25433 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g19222 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00197.g6777 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00197.g6778 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-38 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9762 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02628.g27301 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10350 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000225 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10735 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13629 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g22402 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g5307 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10079400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g794 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00260575 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302451 Trichuris muris From_analysis: WormBase-Compara
    Paralog (121)
    Structured_description: Automated_description: Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans unc-38. In C. elegans, unc-38 is involved in several processes, including calcium ion import across plasma membrane; neuromuscular synaptic transmission; and regulation of multicellular organismal process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE13116
    Corresponding_transcript: CRE13116.1
    Other_sequence (45)
  Experimental_info: Expr_pattern: Expr1114350
    Microarray_results: GPL14146_CRE13116_1321-1380_0.886_25_B
      GPL14146_CRE13116_1438-1497_0.883_27_A
      GPL14146_CRE13116_892-951_0.514_204_C
  Method: Gene