WormBase Tree Display for Gene: WBGene00085850

WBGene00085850 SMap: S_parent: Sequence: Crem_Contig82
  Identity: Version: 2
    Name: CGC_name: Cre-sac-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE09691
      Molecular_name: CRE09691
        CRE09691.1
        RP32778
      Public_name: Cre-sac-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 03 Jul 2008 11:46:54 WBPerson4055 Event: Created
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-sac-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sac
    RNASeq_FPKM: WBls:0000004 12.1924 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        13.5076 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        14.8227 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 13.86 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        14.1684 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        14.5451 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        14.9218 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        17.5826 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        8.76704 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 14.5858 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        19.203 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        19.8383 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        4.71608 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 33.0589 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        34.2133 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        34.7775 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        35.2836 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        35.4366 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        35.7897 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        36.8576 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        37.9228 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 17.2614 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        19.7895 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00172391
    Ortholog (21)
    Paralog: WBGene00061174 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00054782 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00059293 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00066603 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00072763 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00073117 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00079802 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable phosphatase activity. Is an ortholog of C. elegans sac-1. Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE09691
    Corresponding_transcript: CRE09691.1
    Other_sequence: Acan_isotig20376
      RS05779
      GO252851.1
      Tcir_isotig25983
      MH05992
      EX538178.1
      Tcol_isotig04266
      Name_isotig02899
      Dviv_contig09505
      CBC03074_1
      JI171088.1
      Tcir_isotig28878
      Oden_isotig18693
      PSC01344_1
      GP00238
      Tcir_isotig06958
      FC548684.1
      GW408258.1
      RSC01962_1
      HSC00033_1
      HS00543
      FC553406.1
      FC543215.1
      Name_isotig04946
      FC548758.1
      MHC02538_1
      CBC08082_1
      Hbac_isotig04527
      FC553467.1
      Acan_isotig10084
      ACC12568_1
      GPC03133_1
      EX559845.1
  Experimental_info: Expr_pattern: Expr1103072
    Microarray_results: GPL14146_CRE09691_1191-1250_0.707_122_B
      GPL14146_CRE09691_1296-1355_0.910_4_A
      GPL14146_CRE09691_888-947_0.844_30_C
  Method: Gene