WormBase Tree Display for Gene: WBGene00091694
expand all nodes | collapse all nodes | view schema
| WBGene00091694 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-egl-19 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA02140 | ||||||||
| Molecular_name | PPA02140 | ||||||||
| PPA02140.1 | |||||||||
| PP52127 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000058577 | ||||||||
| GENEPREDICTION_SNAP300000058604 | |||||||||
| UMS-S2838-2.57 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-egl-19 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00091721 | ||||
| 3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Ppa-egl-19 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-egl-19 | ||||
| Acquires_merge | WBGene00091721 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | egl | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00174035 | ||||||||
| 00174036 | |||||||||
| 00174037 | |||||||||
| 00174038 | |||||||||
| 00174039 | |||||||||
| 00174040 | |||||||||
| 00174041 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00092845 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00107390 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00116989 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00118298 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Is an ortholog of C. elegans egl-19. In C. elegans, egl-19 is involved in several processes, including determination of left/right asymmetry in nervous system; positive regulation of striated muscle contraction; and regulation of pharyngeal pumping. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA02140 | |||||||
| Corresponding_transcript | PPA02140.1 | ||||||||
| Other_sequence (38) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_31021 | |||||||
| GPL14372_Probes_31022 | |||||||||
| GPL14372_Probes_31023 | |||||||||
| GPL14372_Probes_31024 | |||||||||
| GPL14372_Probes_31025 | |||||||||
| GPL14372_Probes_31026 | |||||||||
| GPL14372_Probes_31027 | |||||||||
| GPL14372_Probes_31028 | |||||||||
| GPL14372_Probes_31029 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-egl-19 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-egl-19 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
