WormBase Tree Display for Gene: WBGene00091782
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| WBGene00091782 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-ufl-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA02228 | ||||||||
| Molecular_name | PPA02228 | ||||||||
| PPA02228.1 | |||||||||
| PP61564 | |||||||||
| Other_name | Ppa-cogc-2 | From_analysis | Inferred_from_orthology | ||||||
| GENEPREDICTION_SNAP300000058665 | |||||||||
| UMM-S2838-6.33 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-ufl-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 04 Jun 2013 14:55:26 | WBPerson2970 | Name_change | CGC_name | Ppa-ufl-1 | ||||
| Other_name | Ppa-cogc-2 | ||||||||
| 3 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| 4 | 08 Feb 2019 15:42:26 | WBPerson1983 | Name_change | CGC_name | Ppa-ufl-1 | ||||
| 5 | 08 May 2019 10:09:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-ufl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ufl | ||||||||
| RNASeq_FPKM | WBls:0000032 | 13.0744 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 13.0744 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 15.6164 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 33.7748 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00174111 | ||||||||
| 00174112 | |||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable UFM1 ligase activity. Predicted to be involved in protein ufmylation. Is an ortholog of C. elegans ufl-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA02228 | |||||||
| Corresponding_transcript | PPA02228.1 | ||||||||
| Other_sequence (12) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_87679 | |||||||
| GPL14372_Probes_87681 | |||||||||
| GPL14372_Probes_87683 | |||||||||
| GPL14372_Probes_87684 | |||||||||
| GPL14372_Probes_87686 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-ufl-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| [190507 pad] The CGC name Ppa-ufl-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
