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WormBase Tree Display for Gene: WBGene00093955

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Name Class

WBGene00093955SMapS_parentSequencePPA_ChrX
IdentityVersion2
NameSequence_namePPA04401
Molecular_namePPA04401
PPA04401.1
PP65752
Other_nameGENEPREDICTION_SNAP300000060819
GENEPREDICTION_SNAP300000065488
UMA-S2845-27.9Person_evidenceWBPerson606
Public_namePPA04401
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00098502
Acquires_mergeWBGene00098502
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
Ortholog (72)
ParalogWBGene00118328Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00098490Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111009Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00111008Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00100627Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111006Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280731Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280781Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280829Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Glycoside hydrolase superfamily. Is an ortholog of C. elegans lys-4; lys-5; and lys-10. In C. elegans, lys-4 is involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA04401
Corresponding_transcriptPPA04401.1
Experimental_infoMicroarray_resultsGPL14372_Probes_1673
MethodGene