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WormBase Tree Display for Gene: WBGene00280829

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Name Class

WBGene00280829SMapS_parentSequencePPA_ChrX
IdentityVersion1
NameSequence_namePPA42460
Molecular_namePPA42460
PPA42460.1
PP53881
Public_namePPA42460
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:22WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
OrthologWBGene00222536Brugia malayiFrom_analysisWormBase-Compara
WBGene00247043Onchocerca volvulusFrom_analysisWormBase-Compara
CSP21.g11639Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g13336Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
ParalogWBGene00093955Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100627Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111006Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111008Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111009Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118328Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280731Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280781Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Glycoside hydrolase superfamily. Is an ortholog of C. elegans lys-4; lys-5; and lys-10. In C. elegans, lys-4 is involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA42460
Corresponding_transcriptPPA42460.1
MethodGene