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WormBase Tree Display for Gene: WBGene00095389

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Name Class

WBGene00095389SMapS_parentSequencePPA_ChrIV
IdentityVersion1
NameSequence_namePPA05835
Molecular_namePPA05835
PPA05835.1
PP74970
Other_nameGENEPREDICTION_SNAP300000063309
UMM-S2838-19.18Person_evidenceWBPerson606
Public_namePPA05835
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003230.5755From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010110.1918From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
OrthologWBGene00145810Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00194128Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00023767Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00013999Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044362Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00129863Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g10837Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g864Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g4590Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g4542Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g9125Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18093Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g4272Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26869Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10666Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g3821Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3035Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8955Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11496Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g27832Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g3643Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24000Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00107.g4505Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g12057Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold171.g659Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15763Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00862.g16210Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01462.g21062Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13838Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_012091Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_012097Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06372Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_40205700Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50245500Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00061384Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00061388Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrII_pilon.g3683Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g12857Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00262396Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00110318Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Phytanoyl-CoA dioxygenase (PhyH) and Phytanoyl-CoA dioxygenase. Is an ortholog of C. elegans F42G2.7 and phyh-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA05835
Corresponding_CDS_historyPPA05835:pp272
Corresponding_transcriptPPA05835.1
Other_sequenceCJC11082_1
Experimental_infoMicroarray_resultsGPL14372_Probes_45081
GPL14372_Probes_45082
GPL14372_Probes_45083
GPL14372_Probes_45084
GPL14372_Probes_45085
Expression_clusterWBPaper00041207:PP_dauer_up
MethodGene