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WormBase Tree Display for Gene: WBGene00097616

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Name Class

WBGene00097616SMapS_parentSequencePPA_ChrV
IdentityVersion1
NameCGC_namePpa-crt-1From_analysisInferred_from_orthology
Sequence_namePPA08062
Molecular_namePPA08062
PPA08062.1
PP68998
Other_nameGENEPREDICTION_SNAP300000064547
UMA-S13-58.21Person_evidenceWBPerson606
Public_namePpa-crt-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcrt
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00176994
00176995
00176996
00176997
OrthologWBGene00000802Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WBGene00030869Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WBGene00058819Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00163782Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00149953Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00138385Caenorhabditis japonicaFrom_analysisInparanoid_8
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity and unfolded protein binding activity. Predicted to be involved in protein folding. Predicted to be located in endoplasmic reticulum. Is an ortholog of C. elegans crt-1. In C. elegans, crt-1 is involved in several processes, including IRE1-mediated unfolded protein response; determination of adult lifespan; and hemidesmosome assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA08062
Corresponding_transcriptPPA08062.1
Other_sequenceRS07319
RS09752
MethodGene