WormBase Tree Display for Gene: WBGene00099809
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WBGene00099809 | SMap | S_parent | Sequence | PPA_ChrX | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 7 | |||||||
Name | CGC_name | Ppa-tbc-18 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA10255 | ||||||||
Molecular_name | PPA10255 | ||||||||
PPA10255.1 | |||||||||
PP52678 | |||||||||
Other_name | GENEPREDICTION_SNAP300000066792 | ||||||||
GENEPREDICTION_SNAP300000066794 | |||||||||
UMM-S2845-2.17 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-tbc-18 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00099811 | ||||
3 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-tbc-18 | ||||
4 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
5 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-tbc-18 | ||||
6 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
7 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Ppa-tbc-18 | ||||
Acquires_merge | WBGene00099811 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tbc | ||||||||
RNASeq_FPKM | WBls:0000032 | 4.30359 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 1.43453 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
Ortholog (30) | |||||||||
Paralog (14) | |||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: RUN domain; SH3-like domain superfamily; SH3 domain; Rab-GTPase-TBC domain superfamily; RUN domain superfamily; and Rab-GTPase-TBC domain. Is an ortholog of C. elegans tbc-18. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA10255 | |||||||
Corresponding_transcript | PPA10255.1 | ||||||||
Other_sequence (34) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_22104 | |||||||
GPL14372_Probes_22105 | |||||||||
GPL14372_Probes_22106 | |||||||||
GPL14372_Probes_22107 | |||||||||
GPL14372_Probes_74639 | |||||||||
GPL14372_Probes_74641 | |||||||||
Expression_cluster | WBPaper00041606:PP_X.nematophila_regulated | ||||||||
Remark | [190208 pad] The CGC name Ppa-tbc-18 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-tbc-18 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |