WormBase Tree Display for Gene: WBGene00103546

WBGene00103546 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 2
    Name: CGC_name: Ppa-cdkr-3 From_analysis: Inferred_from_orthology
      Sequence_name: PPA13992
      Molecular_name: PPA13992
        PPA13992.1
        PP67763
      Other_name: GENEPREDICTION_SNAP300000070789
        UMM-S71-19.70 Person_evidence: WBPerson606
      Public_name: Ppa-cdkr-3
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 04 Jun 2013 14:58:47 WBPerson2970 Name_change: CGC_name: Ppa-cdkr-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdkr
    RNASeq_FPKM: WBls:0000032 13.5958 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 13.5958 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        16.0566 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        9.88413 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog (29)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: CDK5 regulatory subunit-associated protein 3. Is an ortholog of C. elegans cdkr-3. In C. elegans, cdkr-3 is involved in IRE1-mediated unfolded protein response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA13992
    Corresponding_transcript: PPA13992.1
    Other_sequence: Dviv_isotig23268
      CR07719
      CRC06531_1
      Oden_isotig09018
      Oden_isotig09016
      CBC06938_1
      Oden_isotig09019
      PPC08706_1
      Oden_isotig09017
      JI174691.1
  Experimental_info: Microarray_results: GPL14372_Probes_50110
      GPL14372_Probes_50111
      GPL14372_Probes_50112
      GPL14372_Probes_50113
      GPL14372_Probes_50115
      GPL14372_Probes_50117
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Method: Gene