WormBase Tree Display for Gene: WBGene00105466

WBGene00105466 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 9
    Name: CGC_name: Ppa-aagr-4 From_analysis: Inferred_from_orthology
      Sequence_name: PPA15912
      Molecular_name: PPA15912
        PPA15912.1
        PP54801
      Other_name: GENEPREDICTION_SNAP300000072637
        GENEPREDICTION_SNAP300000080498
        GENEPREDICTION_SNAP300000080499
        UMM-S344-1.53 Person_evidence: WBPerson606
        Ppa-aagr-3 From_analysis: Inferred_from_orthology
      Public_name: Ppa-aagr-4
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 16 Apr 2010 14:36:35 WBPerson2970 Name_change: CGC_name: Ppa-aagr-3
        3 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00113157
        4 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00113158
        5 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-aagr-4
                Other_name: Ppa-aagr-3
        6 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        7 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Ppa-aagr-4
        8 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        9 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-aagr-4
      Acquires_merge: WBGene00113158
        WBGene00113157
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: aagr
    RNASeq_FPKM: WBls:0000032 18.4889 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 11.9247 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        17.2852 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00180346
      00180347
      00180348
      00180349
    Ortholog (40)
    Paralog: WBGene00089654 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109710 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114742 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00203226 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276531 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277260 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable carbohydrate binding activity and hydrolase activity, hydrolyzing O-glycosyl compounds. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans aagr-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA15912
    Corresponding_transcript: PPA15912.1
    Other_sequence (57)
  Experimental_info: Microarray_results (12)
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [190208 pad] The CGC name Ppa-aagr-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-aagr-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene