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WormBase Tree Display for Gene: WBGene00277260

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Name Class

WBGene00277260SMapS_parentSequencePPA_ChrX
IdentityVersion1
NameSequence_namePPA38891
Molecular_namePPA38891
PPA38891.1
PP65798
Public_namePPA38891
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.434003From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
1.30201From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
GO_annotation00283619
00283620
00283621
00283622
Ortholog (46)
ParalogWBGene00089654Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105466Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109710Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114742Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00203226Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276531Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbohydrate binding activity and hydrolase activity, hydrolyzing O-glycosyl compounds. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans aagr-3. In C. elegans, aagr-3 is involved in glycogen catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA38891
Corresponding_transcriptPPA38891.1
Other_sequence (14)
Experimental_infoMicroarray_resultsGPL14372_Probes_88724
GPL14372_Probes_88725
GPL14372_Probes_88726
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
MethodGene