WormBase Tree Display for Gene: WBGene00108226

WBGene00108226 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 1
    Name: CGC_name: Ppa-otpl-3 From_analysis: Inferred_from_orthology
      Sequence_name: PPA18672
      Molecular_name: PPA18672
        PPA18672.1
        PP60814
      Other_name: GENEPREDICTION_SNAP300000075486
        UMM-S293-0.59 Person_evidence: WBPerson606
      Public_name: Ppa-otpl-3
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: otpl
    RNASeq_FPKM: WBls:0000032 1.87729 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.625763 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00181689
      00181690
      00181691
    Ortholog (24)
    Paralog: WBGene00092578 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095400 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098324 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111051 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00118829 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272866 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279024 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280095 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280794 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable proton channel activity. Predicted to be involved in proton transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans otpl-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA18672
    Corresponding_transcript: PPA18672.1
    Other_sequence: JO468562.1
      JI214198.1
      JI173919.1
  Experimental_info: Microarray_results: GPL14372_Probes_75302
      GPL14372_Probes_75303
    Expression_cluster: WBPaper00041207:PP_dauer_down
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene