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WormBase Tree Display for Gene: WBGene00108266

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Name Class

WBGene00108266SMapS_parentSequencePPA_ChrX
IdentityVersion5
NameCGC_namePpa-sec-3From_analysisInferred_from_orthology
Sequence_namePPA18712
Molecular_namePPA18712
PPA18712.1
PP75155
Other_nameGENEPREDICTION_SNAP300000075526
GENEPREDICTION_SNAP300000081813
UMM-S293-2.13Person_evidenceWBPerson606
Public_namePpa-sec-3
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00114509
326 Sep 2019 11:46:49WBPerson4055EventSplit_intoWBGene00305030
426 Sep 2019 11:47:05WBPerson4055EventSplit_intoWBGene00305031
526 Sep 2019 11:47:21WBPerson4055EventSplit_intoWBGene00305032
Acquires_mergeWBGene00114509
Split_intoWBGene00305030
WBGene00305031
WBGene00305032
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsec
RNASeq_FPKMWBls:00000324.22477From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.07137From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
4.22477From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.98933From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00181711
00181712
Ortholog (32)
ParalogWBGene00276789Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in exocytosis. Predicted to be part of exocyst. Is an ortholog of C. elegans sec-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA18712
Corresponding_CDS_historyPPA18712:pp273
Corresponding_transcriptPPA18712.1
Other_sequence (23)
Experimental_infoMicroarray_resultsGPL14372_Probes_75443
GPL14372_Probes_75444
GPL14372_Probes_75445
GPL14372_Probes_75446
MethodGene