WormBase Tree Display for Gene: WBGene00305032
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| WBGene00305032 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-cdf-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA47169 | ||||||||
| Molecular_name | PPA47169 | ||||||||
| PPA47169.1 | |||||||||
| PP75284 | |||||||||
| Public_name | Ppa-cdf-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 26 Sep 2019 11:47:21 | WBPerson4055 | Event | Split_from | WBGene00108266 | ||
| 2 | 27 Nov 2019 12:48:14 | WBPerson1983 | Name_change | CGC_name | Ppa-cdf-1 | ||||
| 3 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Ppa-cdf-1 | ||||
| Split_from | WBGene00108266 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cdf | ||||||||
| RNASeq_FPKM | WBls:0000032 | 5.14525 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 2.72789 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 3.03843 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00303400 | ||||||||
| 00303401 | |||||||||
| 00303402 | |||||||||
| 00303403 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00097208 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00105483 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00111384 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00111386 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00276463 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00304635 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable monoatomic cation transmembrane transporter activity. Predicted to be involved in monoatomic cation transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans cdf-1. In C. elegans, cdf-1 is involved in cellular response to zinc ion; positive regulation of Ras protein signal transduction; and positive regulation of vulval development. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA47169 | |||||||
| Corresponding_transcript | PPA47169.1 | ||||||||
| Other_sequence (15) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_75441 | |||||||
| GPL14372_Probes_75442 | |||||||||
| Remark | [210528 pad] The CGC name Ppa-cdf-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
