WormBase Tree Display for Gene: WBGene00108517
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| WBGene00108517 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Identity | Version | 13 | ||||
| Name | CGC_name | Ppa-ctps-1 | From_analysis | Inferred_from_orthology | ||
| Sequence_name | PPA18963 | |||||
| Molecular_name | PPA18963 | |||||
| PPA18963.1 | ||||||
| PP73532 | ||||||
| Other_name | GENEPREDICTION_SNAP300000075782 | |||||
| GENEPREDICTION_SNAP300000075783 | ||||||
| GENEPREDICTION_SNAP300000075785 | ||||||
| GENEPREDICTION_SNAP300000075787 | ||||||
| UMM-S71-24.79 | Person_evidence | WBPerson606 | ||||
| Ppa-pgs-1 | From_analysis | Inferred_from_orthology | ||||
| Public_name | Ppa-ctps-1 | |||||
| Species | Pristionchus pacificus | |||||
| History | Version_change (13) | |||||
| Acquires_merge | WBGene00108520 | |||||
| WBGene00108522 | ||||||
| WBGene00108518 | ||||||
| Status | Live | |||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | ctps | |||||
| RNASeq_FPKM | WBls:0000032 | 7.0596 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
| RNASeq.pristionchus.WBls:0000032.control_median | ||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
| WBls:0000101 | 10.7968 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||
| 25.3307 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||
| RNASeq.pristionchus.WBls:0000101.control_median | ||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
| 7.0596 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||
| GO_annotation | 00181845 | |||||
| 00181846 | ||||||
| 00181847 | ||||||
| Ortholog (40) | ||||||
| Structured_description | Automated_description | Predicted to enable CTP synthase activity. Predicted to be involved in pyrimidine nucleotide biosynthetic process. Is an ortholog of C. elegans ctps-1. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | PPA18963 | ||||
| Corresponding_transcript | PPA18963.1 | |||||
| Other_sequence (74) | ||||||
| Experimental_info | Microarray_results (11) | |||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | |||||
| WBPaper00041466:PP_germline-ablation_regulated | ||||||
| WBPaper00041606:PP_X.nematophila_regulated | ||||||
| Remark | [190208 pad] The CGC name Ppa-pgs-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
| [191127 pad] The CGC name Ppa-ctps-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
| Removing identical Other_name Ppa-pgs-1 | ||||||
| [210528 pad] The CGC name Ppa-ctps-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
| Method | Gene |
