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WormBase Tree Display for Gene: WBGene00109904

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Name Class

WBGene00109904SMapS_parentSequencePPA_ChrX
IdentityVersion3
NameCGC_namePpa-set-20.2From_analysisInferred_from_orthology
Sequence_namePPA20350
Molecular_namePPA20350
PPA20350.1
PP67403
Other_nameGENEPREDICTION_SNAP300000077160
UMM-S2857-6.10Person_evidenceWBPerson606
Public_namePpa-set-20.2
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00205780
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-set-20.2
Acquires_mergeWBGene00205780
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classset
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
Ortholog (13)
ParalogWBGene00095225Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00098313Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00098317Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00104520Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00205265Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: SET domain. Is an ortholog of C. elegans set-20.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA20350
Corresponding_transcriptPPA20350.1
Other_sequencePPC01657_1
PP02359
Experimental_infoMicroarray_resultsGPL14372_Probes_24058
GPL14372_Probes_24059
GPL14372_Probes_24060
GPL14372_Probes_76731
GPL14372_Probes_76732
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
MethodGene