WormBase Tree Display for Gene: WBGene00111438

WBGene00111438 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 2
    Name: CGC_name: Ppa-vit-6.2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA21884
      Molecular_name: PPA21884
        PPA21884.1
        PP10895
      Other_name: GENEPREDICTION_SNAP300000078627
        UMM-S2859-0.31 Person_evidence: WBPerson606
      Public_name: Ppa-vit-6.2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-vit-6.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vit
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.763653 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        2.29096 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00183218
      00183219
    Ortholog (46)
    Paralog: WBGene00093366 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00094952 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100067 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103107 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272482 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277695 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278499 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Is an ortholog of C. elegans vit-6. In C. elegans, vit-6 is involved in negative regulation of protein oxidation; negative regulation of reactive oxygen species biosynthetic process; and positive regulation of cholesterol import. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA21884
    Corresponding_transcript: PPA21884.1
  Experimental_info: Microarray_results: GPL14372_Probes_39128
      GPL14372_Probes_50933
  Method: Gene