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WormBase Tree Display for Gene: WBGene00272482

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Name Class

WBGene00272482SMapS_parentSequencePPA_ChrX
IdentityVersion1
NameSequence_namePPA34113
Molecular_namePPA34113
PPA34113.1
PP54114
Public_namePPA34113
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
2.37712From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
7.13135From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00280658
00280659
Ortholog (37)
ParalogWBGene00093366Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094952Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100067Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103107Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111438Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277695Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278499Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Is an ortholog of C. elegans vit-6. In C. elegans, vit-6 is involved in negative regulation of protein oxidation; negative regulation of reactive oxygen species biosynthetic process; and positive regulation of cholesterol import.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA34113
Corresponding_transcriptPPA34113.1
Other_sequence (16)
Experimental_infoMicroarray_resultsGPL14372_Probes_46517
GPL14372_Probes_46518
GPL14372_Probes_46519
GPL14372_Probes_46521
Expression_clusterWBPaper00041606:PP_S.marcescens_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene