WormBase Tree Display for Gene: WBGene00113693

WBGene00113693 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 5
    Name: CGC_name: Ppa-unc-49 From_analysis: Inferred_from_orthology
      Sequence_name: PPA24139
      Molecular_name: PPA24139
        PPA24139.1
        PP72856
      Other_name: GENEPREDICTION_SNAP300000080890
        GENEPREDICTION_SNAP300000080891
        UMM-S341-5.91 Person_evidence: WBPerson606
      Public_name: Ppa-unc-49
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00113694
        3 08 May 2019 10:09:25 WBPerson1983 Name_change: CGC_name: Ppa-unc-49
        4 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-unc-49
      Acquires_merge: WBGene00113694
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000032 1.39007 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.463357 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00184274
      00184275
      00184276
      00184277
      00184278
      00184279
    Ortholog (29)
    Paralog (120)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-49. In C. elegans, unc-49 is involved in gamma-aminobutyric acid signaling pathway; locomotory behavior; and regulation of backward locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA24139
    Corresponding_transcript: PPA24139.1
    Other_sequence: ACC13002_1
      AS12490
      Dviv_isotig01731
      JI173655.1
      HBC04018_1
      JI483597.1
      FF679062.1
      AA294204.1
      JI481875.1
      PPC02763
      Oden_isotig11873
      ASC09701_1
      FC552734.1
      Dviv_isotig01732
      FG586767.1
      Acan_isotig11576
      WBC02950_1
      Dviv_isotig01730
      OF00308
      CBC01280_1
      JI233161.1
      CD455228.1
      Dviv_isotig01727
      FC552504.1
      EU939734.1
      GPC01025_1
      Oden_isotig11874
      Dviv_isotig01729
      EU049602.1
      JI473398.1
      CR00600
      BMC08633_1
      JI220515.1
      Dviv_isotig01734
      Dviv_isotig01728
      CRC04815_1
      Dviv_isotig01735
      Dviv_isotig10470
      Dviv_isotig01726
      JI226876.1
      FC552536.1
      MH04161
      OVC01230_1
      CRC03502_1
      Dviv_isotig01725
      Dviv_isotig01736
      JI219357.1
      Acan_isotig12744
      Dviv_isotig01733
      CJC06311_1
      Dviv_isotig10471
      PPC09079_1
      GP01590
      JI244415.1
  Experimental_info: Microarray_results (7)
  Remark: [210528 pad] The CGC name Ppa-unc-49 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene