WormBase Tree Display for Gene: WBGene00113693

WBGene00113693 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 5
    Name: CGC_name: Ppa-unc-49 From_analysis: Inferred_from_orthology
      Sequence_name: PPA24139
      Molecular_name: PPA24139
        PPA24139.1
        PP72856
      Other_name: GENEPREDICTION_SNAP300000080890
        GENEPREDICTION_SNAP300000080891
        UMM-S341-5.91 Person_evidence: WBPerson606
      Public_name: Ppa-unc-49
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00113694
        3 08 May 2019 10:09:25 WBPerson1983 Name_change: CGC_name: Ppa-unc-49
        4 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-unc-49
      Acquires_merge: WBGene00113694
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000032 1.39007 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.463357 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00184274
      00184275
      00184276
      00184277
      00184278
      00184279
    Ortholog: WBGene00144273 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00037805 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00226150 Brugia malayi From_analysis: WormBase-Compara
      WBGene00006784 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00130247 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133897 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00211001 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00244711 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g4076 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2958 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4857 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9434 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15298 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14166 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2620 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13596 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4329 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g436 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_12910.g23984 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_III.g9603 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7353 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00128.g5094 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11418 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010455 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_30124910 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00055771 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrIII_pilon.g8886 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00263154 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287048 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00089598 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00089887 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090048 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090088 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090600 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091469 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091715 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091902 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092293 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092487 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092568 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092927 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092981 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093398 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093507 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093530 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093792 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00094886 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095232 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095523 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095561 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095792 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096180 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096314 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096447 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096737 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097397 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097528 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099077 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099079 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099222 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099957 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100028 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100131 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100149 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100788 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101220 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101436 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101775 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102150 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102369 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102482 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103120 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103670 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00104997 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105130 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105387 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105475 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105945 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106281 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106447 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106840 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106841 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107167 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107421 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107500 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107864 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107918 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107966 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108006 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108106 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108406 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109103 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109238 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109439 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109732 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110178 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110305 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110842 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111295 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111807 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112012 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113091 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113305 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113472 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114106 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114665 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114769 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115250 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115506 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115536 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116165 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116273 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116652 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116671 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116699 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00117414 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00118382 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00118813 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00119089 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00119191 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00204046 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272915 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272918 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273181 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273506 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274031 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274324 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274759 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276039 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276047 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276280 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277073 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277528 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277591 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277660 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278203 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278589 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279258 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279699 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279750 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279938 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280196 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280443 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280697 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00284058 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304838 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305088 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305140 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305149 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-49. In C. elegans, unc-49 is involved in gamma-aminobutyric acid signaling pathway; locomotory behavior; and regulation of backward locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA24139
    Corresponding_transcript: PPA24139.1
    Other_sequence: ACC13002_1
      AS12490
      Dviv_isotig01731
      JI173655.1
      HBC04018_1
      JI483597.1
      FF679062.1
      AA294204.1
      JI481875.1
      PPC02763
      Oden_isotig11873
      ASC09701_1
      FC552734.1
      Dviv_isotig01732
      FG586767.1
      Acan_isotig11576
      WBC02950_1
      Dviv_isotig01730
      OF00308
      CBC01280_1
      JI233161.1
      CD455228.1
      Dviv_isotig01727
      FC552504.1
      EU939734.1
      GPC01025_1
      Oden_isotig11874
      Dviv_isotig01729
      EU049602.1
      JI473398.1
      CR00600
      BMC08633_1
      JI220515.1
      Dviv_isotig01734
      Dviv_isotig01728
      CRC04815_1
      Dviv_isotig01735
      Dviv_isotig10470
      Dviv_isotig01726
      JI226876.1
      FC552536.1
      MH04161
      OVC01230_1
      CRC03502_1
      Dviv_isotig01725
      Dviv_isotig01736
      JI219357.1
      Acan_isotig12744
      Dviv_isotig01733
      CJC06311_1
      Dviv_isotig10471
      PPC09079_1
      GP01590
      JI244415.1
  Experimental_info: Microarray_results: GPL14372_Probes_69295
      GPL14372_Probes_69296
      GPL14372_Probes_69298
      GPL14372_Probes_69299
      GPL14372_Probes_69300
      GPL14372_Probes_69301
      GPL14372_Probes_69303
  Remark: [210528 pad] The CGC name Ppa-unc-49 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene