WormBase Tree Display for Gene: WBGene00115083
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| WBGene00115083 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-sbsp-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA25529 | ||||||||
| Molecular_name | PPA25529 | ||||||||
| PPA25529.1 | |||||||||
| PP73042 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000082384 | ||||||||
| UMM-S442-1.0 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-sbsp-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-sbsp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sbsp | ||||||||
| RNASeq_FPKM | WBls:0000032 | 16.3378 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 10.5918 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 15.4375 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Somatomedin-B and thrombospondin type-1 domain-containing protein; Thrombospondin type-1 (TSP1) repeat; Thrombospondin type-1 (TSP1) repeat superfamily; Somatomedin B domain; and Somatomedin B-like domain superfamily. Is an ortholog of C. elegans sbsp-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA25529 | |||||||
| Corresponding_transcript | PPA25529.1 | ||||||||
| Other_sequence | FC548848.1 | ||||||||
| FC540457.1 | |||||||||
| JI173426.1 | |||||||||
| ACC14698_1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_42147 | |||||||
| Method | Gene |
