WormBase Tree Display for Gene: WBGene00117455
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| WBGene00117455 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 10 | |||||||
| Name | CGC_name | Ppa-asic-2.2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA27901 | ||||||||
| Molecular_name | PPA27901 | ||||||||
| PPA27901.1 | |||||||||
| PP69769 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000084722 | ||||||||
| GENEPREDICTION_SNAP300000084723 | |||||||||
| UMM-S2861-6.17 | Person_evidence | WBPerson606 | |||||||
| Ppa-asic-2 | From_analysis | Inferred_from_orthology | |||||||
| Public_name | Ppa-asic-2.2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:07 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00117456 | ||||
| 3 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-asic-2.2 | ||||
| 4 | 08 Feb 2019 15:42:26 | WBPerson1983 | Name_change | CGC_name | Ppa-asic-2 | ||||
| Other_name | Ppa-asic-2.2 | ||||||||
| 5 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Ppa-asic-2.2 | ||||
| Other_name | Ppa-asic-2 | ||||||||
| 6 | 27 Nov 2019 12:48:15 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Ppa-asic-2.2 | ||||
| 8 | 04 Jun 2020 14:38:22 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 9 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-asic-2 | ||||
| 10 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-asic-2.2 | ||||
| Other_name | Ppa-asic-2 | ||||||||
| Acquires_merge | WBGene00117456 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | asic | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00185856 | ||||||||
| 00185857 | |||||||||
| 00185858 | |||||||||
| Ortholog | WBGene00012137 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| WBGene00032913 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| WBGene00130892 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| Pan_g1151 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Pan_g1526 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Pan_g3450 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Pan_g7454 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Pan_g7455 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| Paralog (46) | |||||||||
| Structured_description | Automated_description | Predicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans asic-2. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA27901 | |||||||
| Corresponding_transcript | PPA27901.1 | ||||||||
| Other_sequence | Acan_isotig17420 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_21855 | |||||||
| GPL14372_Probes_21856 | |||||||||
| GPL14372_Probes_21857 | |||||||||
| GPL14372_Probes_21858 | |||||||||
| GPL14372_Probes_21859 | |||||||||
| GPL14372_Probes_21861 | |||||||||
| GPL14372_Probes_21862 | |||||||||
| GPL14372_Probes_21863 | |||||||||
| Remark | [191127 pad] The CGC name Ppa-asic-2.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [200603 pad] The CGC name Ppa-asic-2.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
