WormBase Tree Display for Gene: WBGene00123062
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WBGene00123062 | SMap | S_parent | Sequence | Cjap.Contig18194 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 6 | |||||||
Name | CGC_name | Cjp-unc-78 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | CJA03858 | ||||||||
Molecular_name | CJA03858 | ||||||||
CJA03858.1 | |||||||||
JA44368 | |||||||||
Public_name | Cjp-unc-78 | ||||||||
Species | Caenorhabditis japonica | ||||||||
History | Version_change | 1 | 29 Aug 2008 14:34:20 | WBPerson4055 | Event | Imported | from NGASP | ||
Name_change | CGC_name | Cjp-unc-78 | |||||||
2 | 29 Jul 2011 11:13:37 | WBPerson4055 | Event | Imported | Augustus import | ||||
3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Cjp-unc-78 | ||||
5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Cjp-unc-78 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
RNASeq_FPKM | WBls:0000004 | 112 | From_analysis (3) | ||||||
WBls:0000027 | 80.4012 | From_analysis (3) | |||||||
WBls:0000038 | 100.053 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092 | ||||||
85.9697 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091 | |||||||
93.0114 | From_analysis (2) | ||||||||
WBls:0000041 | 106.217 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094 | ||||||
52.6118 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962 | |||||||
57.5405 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964 | |||||||
58.0588 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963 | |||||||
69.8093 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093 | |||||||
72.3111 | From_analysis | RNASeq.japonica.WBls:0000041.control_median | |||||||
74.0659 | From_analysis | RNASeq.japonica.WBls:0000041.control_mean | |||||||
74.8129 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959 | |||||||
86.6253 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961 | |||||||
86.8515 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960 | |||||||
WBls:0000101 | 74.6885 | From_analysis | RNASeq.japonica.total_over_all_stages.control_mean | ||||||
80.4012 | From_analysis | RNASeq.japonica.total_over_all_stages.control_median | |||||||
Ortholog (38) | |||||||||
Paralog | WBGene00127334 | Caenorhabditis japonica | From_analysis (2) | ||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: WD domain, G-beta repeat; WD40-repeat-containing domain superfamily; G-protein beta WD-40 repeat; WD40/YVTN repeat-like-containing domain superfamily; and WD40 repeat. Is an ortholog of C. elegans unc-78. In C. elegans, unc-78 is involved in several processes, including myofibril assembly; regulation of actin polymerization or depolymerization; and regulation of locomotion. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (3) | |||||||||
Experimental_info | Expr_pattern | Expr1083308 | |||||||
Microarray_results | GPL14145_CJA03858_1278-1337_0.933_3_C | ||||||||
GPL14145_CJA03858_1543-1602_0.939_2_B | |||||||||
GPL14145_CJA03858_1669-1728_0.794_101_A | |||||||||
Remark | [190208 pad] The CGC name Cjp-unc-78 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Cjp-unc-78 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |