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WormBase Tree Display for Gene: WBGene00123062

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Name Class

WBGene00123062SMapS_parentSequenceCjap.Contig18194
IdentityVersion6
NameCGC_nameCjp-unc-78From_analysisInferred_from_orthology
Sequence_nameCJA03858
Molecular_nameCJA03858
CJA03858.1
JA44368
Public_nameCjp-unc-78
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:20WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-unc-78
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:25WBPerson1983Name_changeCGC_nameCjp-unc-78
528 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCjp-unc-78
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000004112From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002780.4012From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:0000038100.053From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
85.9697From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
93.0114From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
WBls:0000041106.217From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
52.6118From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
57.5405From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
58.0588From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
69.8093From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
72.3111From_analysisRNASeq.japonica.WBls:0000041.control_median
74.0659From_analysisRNASeq.japonica.WBls:0000041.control_mean
74.8129From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
86.6253From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
86.8515From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
WBls:000010174.6885From_analysisRNASeq.japonica.total_over_all_stages.control_mean
80.4012From_analysisRNASeq.japonica.total_over_all_stages.control_median
OrthologWBGene00006810Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00034778Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00051990Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00151558Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00233956Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g2528Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g9851Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13119Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g13120Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g16341Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g2549Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g5704Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g9739Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3871Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10480Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5887Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g6423Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g9006Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5069Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17616Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19896Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25454Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g16269Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_01196.g15949Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g23863Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18166Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01673.g22444Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00838Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024093Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14143Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g19544Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g5756Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0270800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g18753Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242169Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00304898Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00256053Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287933Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00127334Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: WD domain, G-beta repeat; WD40-repeat-containing domain superfamily; G-protein beta WD-40 repeat; WD40/YVTN repeat-like-containing domain superfamily; and WD40 repeat. Is an ortholog of C. elegans unc-78. In C. elegans, unc-78 is involved in several processes, including myofibril assembly; regulation of actin polymerization or depolymerization; and regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA03858
Corresponding_transcriptCJA03858.1
Other_sequenceCV198753.1
SRC00391_1
AS17783
JO467666.1
PPC02445_1
JI164870.1
Oden_isotig07658
Acan_isotig02211
GP01391
HG01202
SSC03731_1
Oden_isotig07657
Dviv_isotig23759
ES744585.1
ACC15617_1
FG977881.1
CRC00405_1
MJ04313
Acan_isotig02210
ACC10624_1
ZP00177
SR03623
EG025772.1
NBC01296_1
CJC06423_1
ACC01506_1
FC818890.1
Hbac_isotig04330
ZPC00107_1
EX554810.1
HBC28067_1
Oden_isotig07656
FK809842.1
Oden_isotig07660
FG353622.1
Tcol_isotig02224
Tcol_isotig02223
Acan_isotig02209
OVC00395_1
CBC04041_1
EX916160.1
ES411502.1
BXC06661_1
TX01588
FC819313.1
CR01606
MA02765
EL887611.1
FC813158.1
BXC04343_1
MJ04317
EX559491.1
PP02109
Tcol_isotig02221
Oden_isotig07659
FE913882.1
MJ04305
SS03183
ES411972.1
EX911153.1
GP03065
BQ834036.2
ASC29590_1
ASC01161_1
PTC02180_1
HBC05540_1
FD515231.1
Tcir_isotig08647
Oden_isotig07654
SR00329
Dviv_isotig27341
FC547116.1
GP01075
PT02655
MJ04325
Tcol_isotig02222
Oden_isotig07653
FC814950.1
SSC00646_1
MP01933
PT03634
EY468780.1
AA294394.1
MI04096
ALC01004_1
TCC01559_1
EG025773.1
MIC01804_1
CSC01896_1
FC539090.1
CR04548
MJ04319
BUC01778_1
SS02052
Hbac_isotig01512
Oden_isotig07655
AW313100.1
CR02080
CJC01140_1
HGC04246_1
NB10757
HBC05572_1
CRC02077_1
FE909781.1
MI00481
CJC00179_1
CBC12152_1
ASC00142_1
CR06711
Oden_isotig07661
PVC03428_1
GPC02283_1
Experimental_infoExpr_patternExpr1083308
Microarray_resultsGPL14145_CJA03858_1278-1337_0.933_3_C
GPL14145_CJA03858_1543-1602_0.939_2_B
GPL14145_CJA03858_1669-1728_0.794_101_A
Remark[190208 pad] The CGC name Cjp-unc-78 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cjp-unc-78 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene