WormBase Tree Display for Gene: WBGene00123260

WBGene00123260 SMap: S_parent: Sequence: Cjap.Contig17742
  Identity: Version: 2
    Name: CGC_name: Cjp-hcf-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA04056
      Molecular_name: CJA04056
        CJA04056.1
        JA68545
      Public_name: Cjp-hcf-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-hcf-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hcf
    RNASeq_FPKM: WBls:0000004 67.8739 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 26.3858 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 18.6706 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        20.4974 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        22.3242 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 12.384 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        12.4077 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        14.5395 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        16.9294 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        43.5887 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        47.0145 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        70.2481 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        80.6152 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        83.4746 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        85.5172 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 22.3242 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        39.3362 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (32)
    Paralog: WBGene00126482 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Kelch-type beta propeller; Host cell factor; Fibronectin type III; Immunoglobulin-like fold; Galactose oxidase, central domain; and Kelch motif. Is an ortholog of C. elegans hcf-1. In C. elegans, hcf-1 is involved in several processes, including dauer exit; determination of adult lifespan; and regulation of DNA-templated transcription. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA04056
    Corresponding_CDS_history: CJA04056:jp241
    Corresponding_transcript: CJA04056.1
    Other_sequence (26)
  Experimental_info: Expr_pattern: Expr1077546
    Microarray_results: GPL14145_CJA04056_1801-1860_0.619_286_B
      GPL14145_CJA04056_1938-1997_0.908_12_A
      GPL14145_CJA04056_1971-2030_0.944_5_C
  Method: Gene