WormBase Tree Display for Gene: WBGene00125162

WBGene00125162 SMap: S_parent: Sequence: Cjap.Contig17502
  Identity: Version: 5
    Name: CGC_name: Cjp-nmtn-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA05958
      Molecular_name: CJA05958
        CJA05958.1
        JA52216
      Public_name: Cjp-nmtn-1.2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cjp-nmtn-1.2
        4 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cjp-nmtn-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nmtn
    RNASeq_FPKM: WBls:0000004 2.30564 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 2.34105 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 1.2347 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        1.32279 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        1.41088 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.380318 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.383797 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        1.5288 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.61362 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        1.75101 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.89313 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        2.17265 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        2.23701 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        2.32468 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        3.36724 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 1.61362 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        1.63849 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (47)
    Paralog: WBGene00131509 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Anaphase-promoting complex subunit 4, WD40 domain; Anaphase-promoting complex subunit 4 WD40 domain; WD repeat-containing protein 47; WD40-repeat-containing domain superfamily; WD40/YVTN repeat-like-containing domain superfamily; and WD40 repeat. Is an ortholog of C. elegans nmtn-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA05958
    Corresponding_transcript: CJA05958.1
    Other_sequence (14)
  Experimental_info: Microarray_results: GPL14145_CJA05958_1065-1124_0.599_86_A
      GPL14145_CJA05958_773-832_0.726_33_B
  Remark: [190208 pad] The CGC name Cjp-nmtn-1.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene