WormBase Tree Display for Gene: WBGene00133120

WBGene00133120 SMap: S_parent: Sequence: Cjap.Contig17564
  Identity: Version: 7
    Name: CGC_name: Cjp-lron-6 From_analysis: Inferred_from_orthology
      Sequence_name: CJA13916
      Molecular_name: CJA13916
        CJA13916.1
        JA47424
      Public_name: Cjp-lron-6
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 09 Dec 2011 15:52:14 WBPerson2970 Name_change: CGC_name: Cjp-lron-6
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Cjp-lron-6
        6 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cjp-lron-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lron
    RNASeq_FPKM: WBls:0000004 0.443318 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 0.213727 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0.135156 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        0.270312 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.06198 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.213918 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.235896 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.239002 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        0.266264 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.293525 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.29983 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.302347 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.467433 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.607192 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
      WBls:0000101 0.239002 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        0.257395 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (25)
    Paralog: WBGene00126038 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00132330 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00134178 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00134711 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; Leucine rich repeat; and Leucine-rich repeat, typical subtype. Is an ortholog of C. elegans lron-6. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA13916
    Corresponding_transcript: CJA13916.1
    Other_sequence: EY463118.1
      Tcol_isotig15839
      EY468260.1
      ACC16018_1
      ACC33573_1
  Experimental_info: Expr_pattern: Expr1076308
    Microarray_results: GPL14145_CJA13916_1137-1196_0.742_136_C
      GPL14145_CJA13916_1279-1338_0.799_89_A
      GPL14145_CJA13916_1557-1616_0.949_2_B
  Remark: [190208 pad] The CGC name Cjp-lron-6 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cjp-lron-6 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene