WormBase Tree Display for Gene: WBGene00133225

WBGene00133225 SMap: S_parent: Sequence: Cjap.Contig18190
  Identity: Version: 2
    Name: CGC_name: Cjp-lin-2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA14021
      Molecular_name: CJA14021
        CJA14021.1
        JA42836
      Public_name: Cjp-lin-2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-lin-2
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lin
    RNASeq_FPKM: WBls:0000004 14.63 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 13.2136 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 7.11241 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        8.27547 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        9.43853 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 1.87594 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        2.16051 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        2.23573 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        2.44775 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        2.59828 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        2.7062 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        2.74882 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        2.97314 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        3.40582 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        3.80188 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
      WBls:0000101 2.97314 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        5.08032 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (24)
    Paralog: WBGene00136253 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00136310 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00134634 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00121102 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00180270 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: L27 domain, C-terminal; SH3-like domain superfamily; SH3 domain; L27 domain; Guanylate kinase/L-type calcium channel beta subunit; P-loop containing nucleoside triphosphate hydrolase; PDZ superfamily; Guanylate kinase; and PDZ domain. Is an ortholog of C. elegans lin-2. In C. elegans, lin-2 is involved in several processes, including egg-laying behavior; positive regulation of vulval development; and protein localization to membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA14021
    Corresponding_transcript: CJA14021.1
    Other_sequence (42)
  Experimental_info: Expr_pattern: Expr1091746
    Microarray_results: GPL14145_CJA14021_1097-1156_0.906_17_B
      GPL14145_CJA14021_1228-1287_0.894_28_C
      GPL14145_CJA14021_1378-1437_0.922_10_A
  Method: Gene