WormBase Tree Display for Gene: WBGene00136401

WBGene00136401 SMap: S_parent: Sequence: Cjap.Contig18114
  Identity: Version: 2
    Name: CGC_name: Cjp-vha-5 From_analysis: Inferred_from_orthology
      Sequence_name: CJA17196
      Molecular_name: CJA17196
        CJA17196.1
        JA00071
      Public_name: Cjp-vha-5
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-vha-5
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vha
    RNASeq_FPKM: WBls:0000004 56.6923 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 116.241 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 128.995 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        137.032 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        145.069 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 25.8985 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        44.2132 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        56.2253 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        56.9703 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        57.0301 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        59.0684 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        61.1066 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        65.8079 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        68.2542 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        70.5213 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
      WBls:0000101 61.1066 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        68.9846 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00200376
      00200377
      00200378
      00200379
    Ortholog (32)
    Paralog: WBGene00131539 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00132495 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00120256 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133130 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00180595 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00212986 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans vha-5. In C. elegans, vha-5 is involved in several processes, including collagen and cuticulin-based cuticle development; exosomal secretion; and multicellular organismal-level water homeostasis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA17196
    Corresponding_transcript: CJA17196.1
    Other_sequence (108)
  Experimental_info: Expr_pattern: Expr1071000
    Microarray_results: GPL14145_CJA17196_2022-2081_0.894_5_C
      GPL14145_CJA17196_2227-2286_0.706_217_B
      GPL14145_CJA17196_2540-2599_0.688_242_A
  Method: Gene