WormBase Tree Display for Gene: WBGene00141508

WBGene00141508 SMap: S_parent: Sequence: Cbre_Contig1320
  Identity: Version: 2
    Name: CGC_name: Cbn-sde-2.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN02783
      Molecular_name: CBN02783
        CBN02783.1
        CN04023
      Public_name: Cbn-sde-2.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Cbn-sde-2.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sde
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 1.15931 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        2.31862 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 12.5443 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        13.1361 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        15.2344 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        5.53077 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        7.30737 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 0.686941 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        0.777767 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        0.868593 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (14)
      WBls:0000101 1.31231 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        4.42258 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (29)
    Paralog: WBGene00162587 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00156411 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00158907 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Replication stress response SDE2 C-terminal; Silencing defective 2 N-terminal ubiquitin domain; and Sde2, N-terminal ubiquitin domain. Is an ortholog of C. elegans sde-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN02783
    Corresponding_transcript: CBN02783.1
    Other_sequence: CRC07825_1
      Acan_isotig09386
      Dviv_isotig09038
      Dviv_isotig09037
      Hbac_isotig01029
      CR00703
      ACC07966_1
      Dviv_isotig09039
  Experimental_info: Microarray_results: GPL14142_CBN02783_506-565_0.887_15_B
      GPL14142_CBN02783_1303-1362_0.651_150_A
      GPL14142_CBN02783_1378-1437_0.823_47_C
  Method: Gene