WormBase Tree Display for Gene: WBGene00142179

WBGene00142179 SMap: S_parent: Sequence: Cbre_Contig40
  Identity: Version: 1
    Name: CGC_name: Cbn-tni-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBN03454
      Molecular_name: CBN03454
        CBN03454.1
        CN25587
      Other_name: CBN03454
      Public_name: Cbn-tni-3
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-tni-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tni
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.94269 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        1.88538 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 168.82 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        204.243 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        215.405 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        222.818 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        275.395 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 149.438 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        167.154 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        184.871 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 127.287 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        50.55 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00204937
    Ortholog (33)
    Paralog: WBGene00158790 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00150453 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00161700 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00154374 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be part of troponin complex. Is an ortholog of C. elegans tni-3. In C. elegans, tni-3 is involved in egg-laying behavior; muscle contraction; and post-embryonic body morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN03454
    Corresponding_transcript: CBN03454.1
    Other_sequence (44)
  Experimental_info: Microarray_results: GPL14142_CBN03454_239-298_0.882_15_C
      GPL14142_CBN03454_419-478_0.925_2_B
      GPL14142_CBN03454_538-597_0.931_1_A
  Method: Gene