WormBase Tree Display for Gene: WBGene00148673

WBGene00148673 SMap: S_parent: Sequence: Cbre_Contig53
  Identity: Version: 2
    Name: CGC_name: Cbn-unc-6 From_analysis: Inferred_from_orthology
      Sequence_name: CBN09948
      Molecular_name: CBN09948
        CBN09948.1
        CN26274
      Public_name: Cbn-unc-6
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-unc-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        4.90188 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        9.80376 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 11.5863 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        12.683 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        8.0275 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        8.25465 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        9.44896 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 6.00247 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        6.79515 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        7.58783 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (15)
      WBls:0000101 2.4593 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        2.82432 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog: WBGene00006746 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00032168 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00051410 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00119812 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g3278 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10853 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21093 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15050 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2767 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20643 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9212 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10840 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g375 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g10862 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00160.g5922 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_05761.g19817 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold570.g4243 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00707.g14621 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00273 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024674 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01017 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g4021 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0196500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00113122 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00224249 Brugia malayi From_analysis: WormBase-Compara
      chrX_pilon.g19321 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242009 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00266163 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00297119 Trichuris muris From_analysis: WormBase-Compara
      WBGene00300156 Trichuris muris From_analysis: WormBase-Compara
    Paralog (24)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Laminin, N-terminal; UNC-6/NTR/C345C module; Laminin-type EGF domain; Tissue inhibitor of metalloproteinases-like, OB-fold; Netrin module, non-TIMP type; Laminin EGF domain; and Laminin N-terminal (Domain VI). Is an ortholog of C. elegans unc-6. In C. elegans, unc-6 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN09948
    Corresponding_CDS_history: CBN09948:np197
    Corresponding_transcript: CBN09948.1
    Other_sequence (20)
  Experimental_info: Microarray_results: GPL14142_CBN09948_817-876_0.882_21_B
      GPL14142_CBN09948_1056-1115_0.878_26_C
      GPL14142_CBN09948_1062-1121_0.880_22_A
  Method: Gene