WormBase Tree Display for Gene: WBGene00149586

WBGene00149586 SMap: S_parent: Sequence: Cbre_Contig211
  Identity: Version: 3
    Name: CGC_name: Cbn-smg-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN10861
      Molecular_name: CBN10861
        CBN10861.1
        CN35737
      Public_name: Cbn-smg-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 05 May 2009 14:30:25 WBPerson615 Event: Acquires_merge: WBGene00164267
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-smg-1
      Acquires_merge: WBGene00164267
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: smg
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 11.1131 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        5.55655 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        4.91152 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        5.50492 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        6.69431 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        6.87951 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        8.52241 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 4.54535 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        4.8469 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        5.14845 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 3.12821 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        3.28095 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00211013
      00211014
      00211015
    Ortholog (28)
    Paralog (15)
    Structured_description: Automated_description: Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay and phosphorylation. Is an ortholog of C. elegans smg-1. In C. elegans, smg-1 is involved in male genitalia development; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; and obsolete hermaphrodite genitalia development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN10861
    Corresponding_CDS_history: CBN10861:np203
    Corresponding_transcript: CBN10861.1
    Other_sequence: AYC02188_1
      JI163890.1
      CSC01836_1
      CRC05171_1
      CR09903
      FD514278.1
      AE00740
  Method: Gene