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WormBase Tree Display for Gene: WBGene00151795

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Name Class

WBGene00151795SMapS_parentSequenceCbre_Contig0
IdentityVersion1
NameCGC_nameCbn-vang-1From_analysisInferred_from_orthology
Sequence_nameCBN13070
Molecular_nameCBN13070
CBN13070.1
CN19663
Other_nameCBN13070
Public_nameCbn-vang-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-vang-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvang
RNASeq_FPKMWBls:00000020.5833From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0.706364From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
0.796888From_analysisRNASeq.brenneri.WBls:0000002.control_median
0.887413From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
1.40764From_analysisRNASeq.brenneri.WBls:0000002.control_mean
1.78122From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
1.89521From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
3.89348From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
4.32945From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
WBls:0000004182.163From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
30.6819From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
333.644From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
3.14047From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
3.36735From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
3.87144From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
5.12073From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
5.57219From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000380.846116From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
1.53251From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
2.21891From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (14)
WBls:00001010.887413From_analysisRNASeq.brenneri.total_over_all_stages.control_median
14.5057From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00212784
00212785
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans vang-1. In C. elegans, vang-1 is involved in Wnt signaling pathway, planar cell polarity pathway and digestive tract morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN13070
Corresponding_transcriptCBN13070.1
Other_sequence (11)
Experimental_infoMicroarray_resultsGPL14142_CBN13070_513-572_0.831_93_B
GPL14142_CBN13070_583-642_0.867_55_C
GPL14142_CBN13070_765-824_0.850_71_A
MethodGene