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WormBase Tree Display for Gene: WBGene00154155

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Name Class

WBGene00154155SMapS_parentSequenceCbre_Contig67
IdentityVersion1
NameSequence_nameCBN15430
Molecular_nameCBN15430
CBN15430.1
CN09935
Public_nameCBN15430
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.088862From_analysisRNASeq.brenneri.WBls:0000002.control_median
0.118043From_analysisRNASeq.brenneri.WBls:0000002.control_mean
0.177724From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
0.189779From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
0.190978From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
0.282929From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
0.339024From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
WBls:00000040.093121From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.186243From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
3.50245From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
6.19215From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
6.24666From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
6.61634From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
6.71649From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000380.535734From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
0.662575From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
0.789416From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (13)
WBls:00001010.108618From_analysisRNASeq.brenneri.total_over_all_stages.control_median
0.20277From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00214630
00214631
00214632
00214633
OrthologWBGene00006809Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00027947Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00066082Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00107390Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00122833Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00135142Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
CBOVI.g8570Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g184Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g185Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14560Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21109Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10428Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7911Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g7912Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10214Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2263Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15963Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g5565Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cang_2012_03_13_06589.g20353Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-77Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17351Caenorhabditis tropicalisFrom_analysisWormBase-Compara
FL83_20372Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013653Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12811Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14329Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40161400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00073165Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00074869Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00080174Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00084742Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00092845Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00222695Brugia malayiFrom_analysisWormBase-Compara
chrIV_pilon.g10560Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00245319Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266153Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00140494Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00153792Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00147845Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153171Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00163993Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00190957Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00191184Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-77. In C. elegans, unc-77 is involved in positive regulation of GABAergic synaptic transmission; positive regulation of cholinergic synaptic transmission; and positive regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN15430
Corresponding_transcriptCBN15430.1
Other_sequenceMH05435
MH05537
MCC02623_1
MethodGene